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Cluster: Rep_1802_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1802_c_30 Rep_1802_c_30_2 144 2087 - 2.A.67.4.3
TC Rep_1802_c_30 Rep_1802_c_30_3 2401 4179 + 2.A.21.3.2
NULL(UNKNOWN) Rep_1802_c_30 Rep_1802_c_30_4 4195 4494 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase Rep_1802_c_30 Rep_1802_c_30_5 4920 5864 + S1_46
TC Rep_1802_c_30 Rep_1802_c_30_6 5864 7261 + 2.A.1.3.37
STP Rep_1802_c_30 Rep_1802_c_30_7 7492 8463 + PfkB
TC Rep_1802_c_30 Rep_1802_c_30_8 8978 9730 + 2.A.89.3.2
STP Rep_1802_c_30 Rep_1802_c_30_9 10041 10727 - Peripla_BP_3
STP Rep_1802_c_30 Rep_1802_c_30_10 11297 12610 + SBP_bac_1
TC Rep_1802_c_30 Rep_1802_c_30_11 12794 13552 + 3.A.1.1.21
TC Rep_1802_c_30 Rep_1802_c_30_12 13560 14441 + 3.A.1.1.36
CAZyme Rep_1802_c_30 Rep_1802_c_30_13 14471 15559 + GH172
Gene ID: Rep_1802_c_30_2
Type: TC
Location: 144 - 2087 (-)
Gene ID: Rep_1802_c_30_3
Type: TC
Location: 2401 - 4179 (+)
Gene ID: Rep_1802_c_30_4
Type:
Location: 4195 - 4494 (+)
Gene ID: Rep_1802_c_30_5
Type: sulfatase
Location: 4920 - 5864 (+)
Gene ID: Rep_1802_c_30_6
Type: TC
Location: 5864 - 7261 (+)
Gene ID: Rep_1802_c_30_7
Type: STP
Location: 7492 - 8463 (+)
Gene ID: Rep_1802_c_30_8
Type: TC
Location: 8978 - 9730 (+)
Gene ID: Rep_1802_c_30_9
Type: STP
Location: 10041 - 10727 (-)
Gene ID: Rep_1802_c_30_10
Type: STP
Location: 11297 - 12610 (+)
Gene ID: Rep_1802_c_30_11
Type: TC
Location: 12794 - 13552 (+)
Gene ID: Rep_1802_c_30_12
Type: TC
Location: 13560 - 14441 (+)
Gene ID: Rep_1802_c_30_13
Type: CAZyme
Location: 14471 - 15559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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