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Cluster: Rep_1795_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1795_c_16 Rep_1795_c_16_1 3 851 + GH25
pfam Rep_1795_c_16 Rep_1795_c_16_2 1116 2435 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme Rep_1795_c_16 Rep_1795_c_16_3 2449 3717 + GT4
pfam Rep_1795_c_16 Rep_1795_c_16_4 3783 5081 + Polysacc_synt | Polysacc_synt_3
CAZyme Rep_1795_c_16 Rep_1795_c_16_5 5114 6238 + GH177
pfam Rep_1795_c_16 Rep_1795_c_16_6 6334 6924 + Hexapep | Hexapep_2 | Hexapep_2
STP Rep_1795_c_16 Rep_1795_c_16_7 6934 8067 + Aminotran_1_2
TC Rep_1795_c_16 Rep_1795_c_16_8 8088 10058 + 9.B.18.2.1
pfam Rep_1795_c_16 Rep_1795_c_16_9 10172 11395 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC Rep_1795_c_16 Rep_1795_c_16_10 11556 12242 + 9.B.18.1.3
Gene ID: Rep_1795_c_16_1
Type: CAZyme
Location: 3 - 851 (+)
Gene ID: Rep_1795_c_16_2
Type: pfam
Location: 1116 - 2435 (+)
Gene ID: Rep_1795_c_16_3
Type: CAZyme
Location: 2449 - 3717 (+)
Gene ID: Rep_1795_c_16_4
Type: pfam
Location: 3783 - 5081 (+)
Gene ID: Rep_1795_c_16_5
Type: CAZyme
Location: 5114 - 6238 (+)
Gene ID: Rep_1795_c_16_6
Type: pfam
Location: 6334 - 6924 (+)
Gene ID: Rep_1795_c_16_7
Type: STP
Location: 6934 - 8067 (+)
Gene ID: Rep_1795_c_16_8
Type: TC
Location: 8088 - 10058 (+)
Gene ID: Rep_1795_c_16_9
Type: pfam
Location: 10172 - 11395 (+)
Gene ID: Rep_1795_c_16_10
Type: TC
Location: 11556 - 12242 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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