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Cluster: Rep_1795_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1795_c_14 Rep_1795_c_14_3 3083 3760 + GH23
TC Rep_1795_c_14 Rep_1795_c_14_4 4186 5508 + 3.D.6.1.2
TC Rep_1795_c_14 Rep_1795_c_14_5 5517 6494 + 3.D.6.1.2
pfam Rep_1795_c_14 Rep_1795_c_14_6 6491 7075 + FMN_bind
TC Rep_1795_c_14 Rep_1795_c_14_7 7086 7730 + 3.D.6.1.2
TC Rep_1795_c_14 Rep_1795_c_14_8 7741 8316 + 3.D.6.1.2
TC Rep_1795_c_14 Rep_1795_c_14_9 8337 9200 + 3.D.6.1.2
pfam Rep_1795_c_14 Rep_1795_c_14_10 9215 10417 + GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
pfam Rep_1795_c_14 Rep_1795_c_14_11 10590 10988 + NusG_II
TC Rep_1795_c_14 Rep_1795_c_14_12 10992 11561 + 2.A.87.3.1
pfam Rep_1795_c_14 Rep_1795_c_14_13 11527 12321 + RadC | UPF0758_N
TC Rep_1795_c_14 Rep_1795_c_14_14 12404 13441 + 9.B.157.1.1
TC Rep_1795_c_14 Rep_1795_c_14_15 13419 14354 + 9.B.157.1.3
Gene ID: Rep_1795_c_14_3
Type: CAZyme
Location: 3083 - 3760 (+)
Gene ID: Rep_1795_c_14_4
Type: TC
Location: 4186 - 5508 (+)
Gene ID: Rep_1795_c_14_5
Type: TC
Location: 5517 - 6494 (+)
Gene ID: Rep_1795_c_14_6
Type: pfam
Location: 6491 - 7075 (+)
Gene ID: Rep_1795_c_14_7
Type: TC
Location: 7086 - 7730 (+)
Gene ID: Rep_1795_c_14_8
Type: TC
Location: 7741 - 8316 (+)
Gene ID: Rep_1795_c_14_9
Type: TC
Location: 8337 - 9200 (+)
Gene ID: Rep_1795_c_14_10
Type: pfam
Location: 9215 - 10417 (+)
Gene ID: Rep_1795_c_14_11
Type: pfam
Location: 10590 - 10988 (+)
Gene ID: Rep_1795_c_14_12
Type: TC
Location: 10992 - 11561 (+)
Gene ID: Rep_1795_c_14_13
Type: pfam
Location: 11527 - 12321 (+)
Gene ID: Rep_1795_c_14_14
Type: TC
Location: 12404 - 13441 (+)
Gene ID: Rep_1795_c_14_15
Type: TC
Location: 13419 - 14354 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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