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Cluster: Rep_1794_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1794_c_20 Rep_1794_c_20_62 68244 68921 + GH23
TC Rep_1794_c_20 Rep_1794_c_20_63 69291 70613 + 3.D.6.1.2
TC Rep_1794_c_20 Rep_1794_c_20_64 70622 71599 + 3.D.6.1.2
pfam Rep_1794_c_20 Rep_1794_c_20_65 71596 72180 + FMN_bind
TC Rep_1794_c_20 Rep_1794_c_20_66 72191 72835 + 3.D.6.1.2
TC Rep_1794_c_20 Rep_1794_c_20_67 72846 73421 + 3.D.6.1.2
TC Rep_1794_c_20 Rep_1794_c_20_68 73442 74302 + 3.D.6.1.2
pfam Rep_1794_c_20 Rep_1794_c_20_69 74317 75519 + GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
pfam Rep_1794_c_20 Rep_1794_c_20_70 75687 76085 + NusG_II
TC Rep_1794_c_20 Rep_1794_c_20_71 76089 76658 + 2.A.87.3.1
pfam Rep_1794_c_20 Rep_1794_c_20_72 76624 77418 + RadC | UPF0758_N
TC Rep_1794_c_20 Rep_1794_c_20_73 77499 78530 + 9.B.157.1.1
TC Rep_1794_c_20 Rep_1794_c_20_74 78514 79440 + 9.B.157.1.3
Gene ID: Rep_1794_c_20_62
Type: CAZyme
Location: 68244 - 68921 (+)
Gene ID: Rep_1794_c_20_63
Type: TC
Location: 69291 - 70613 (+)
Gene ID: Rep_1794_c_20_64
Type: TC
Location: 70622 - 71599 (+)
Gene ID: Rep_1794_c_20_65
Type: pfam
Location: 71596 - 72180 (+)
Gene ID: Rep_1794_c_20_66
Type: TC
Location: 72191 - 72835 (+)
Gene ID: Rep_1794_c_20_67
Type: TC
Location: 72846 - 73421 (+)
Gene ID: Rep_1794_c_20_68
Type: TC
Location: 73442 - 74302 (+)
Gene ID: Rep_1794_c_20_69
Type: pfam
Location: 74317 - 75519 (+)
Gene ID: Rep_1794_c_20_70
Type: pfam
Location: 75687 - 76085 (+)
Gene ID: Rep_1794_c_20_71
Type: TC
Location: 76089 - 76658 (+)
Gene ID: Rep_1794_c_20_72
Type: pfam
Location: 76624 - 77418 (+)
Gene ID: Rep_1794_c_20_73
Type: TC
Location: 77499 - 78530 (+)
Gene ID: Rep_1794_c_20_74
Type: TC
Location: 78514 - 79440 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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