Cluster: Rep_1794_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1794
- CGC Family ID: CGCFAM_04087
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1794_c_15 | Rep_1794_c_15_17 | 18931 | 20088 | - | CE4 |
| pfam | Rep_1794_c_15 | Rep_1794_c_15_18 | 20294 | 23086 | + | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| TC | Rep_1794_c_15 | Rep_1794_c_15_19 | 23079 | 24227 | + | 3.A.1.132.6 |
Gene ID: Rep_1794_c_15_17
Type: CAZyme
Location: 18931 - 20088 (-)
Type: CAZyme
Location: 18931 - 20088 (-)
Gene ID: Rep_1794_c_15_18
Type: pfam
Location: 20294 - 23086 (+)
Type: pfam
Location: 20294 - 23086 (+)
Gene ID: Rep_1794_c_15_19
Type: TC
Location: 23079 - 24227 (+)
Type: TC
Location: 23079 - 24227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Murdochiella
Species
Murdochiella sp902488755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.