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Cluster: Rep_1793_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1793_c_21 Rep_1793_c_21_47 57464 58699 + 2.A.1.59.4
sulfatase Rep_1793_c_21 Rep_1793_c_21_48 58773 61421 + S1_2
pfam Rep_1793_c_21 Rep_1793_c_21_49 61491 62144 + CoaE
CAZyme Rep_1793_c_21 Rep_1793_c_21_50 62137 62808 + GH23
TC Rep_1793_c_21 Rep_1793_c_21_51 63201 64523 + 3.D.6.1.2
TC Rep_1793_c_21 Rep_1793_c_21_52 64532 65509 + 3.D.6.1.2
pfam Rep_1793_c_21 Rep_1793_c_21_53 65506 66099 + FMN_bind
TC Rep_1793_c_21 Rep_1793_c_21_54 66110 66754 + 3.D.6.1.2
TC Rep_1793_c_21 Rep_1793_c_21_55 66765 67340 + 3.D.6.1.2
TC Rep_1793_c_21 Rep_1793_c_21_56 67357 68217 + 3.D.6.1.2
Gene ID: Rep_1793_c_21_47
Type: TC
Location: 57464 - 58699 (+)
Gene ID: Rep_1793_c_21_48
Type: sulfatase
Location: 58773 - 61421 (+)
Gene ID: Rep_1793_c_21_49
Type: pfam
Location: 61491 - 62144 (+)
Gene ID: Rep_1793_c_21_50
Type: CAZyme
Location: 62137 - 62808 (+)
Gene ID: Rep_1793_c_21_51
Type: TC
Location: 63201 - 64523 (+)
Gene ID: Rep_1793_c_21_52
Type: TC
Location: 64532 - 65509 (+)
Gene ID: Rep_1793_c_21_53
Type: pfam
Location: 65506 - 66099 (+)
Gene ID: Rep_1793_c_21_54
Type: TC
Location: 66110 - 66754 (+)
Gene ID: Rep_1793_c_21_55
Type: TC
Location: 66765 - 67340 (+)
Gene ID: Rep_1793_c_21_56
Type: TC
Location: 67357 - 68217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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