Cluster: Rep_1793_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1793
- CGC Family ID: CGCFAM_04087
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1793_c_13 | Rep_1793_c_13_120 | 120903 | 121988 | - | 3.A.1.132.6 |
| TF | Rep_1793_c_13 | Rep_1793_c_13_121 | 121972 | 122328 | - | GntR |
| pfam | Rep_1793_c_13 | Rep_1793_c_13_122 | 122386 | 125181 | - | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| CAZyme | Rep_1793_c_13 | Rep_1793_c_13_123 | 125455 | 126603 | + | CE4 |
| TC | Rep_1793_c_13 | Rep_1793_c_13_124 | 126873 | 128330 | + | 2.A.114.1.4 |
| NULL(UNKNOWN) | Rep_1793_c_13 | Rep_1793_c_13_125 | 128396 | 129403 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1793_c_13 | Rep_1793_c_13_126 | 130033 | 130593 | + | 2.A.88.9.1 |
Gene ID: Rep_1793_c_13_120
Type: TC
Location: 120903 - 121988 (-)
Type: TC
Location: 120903 - 121988 (-)
Gene ID: Rep_1793_c_13_121
Type: TF
Location: 121972 - 122328 (-)
Type: TF
Location: 121972 - 122328 (-)
Gene ID: Rep_1793_c_13_122
Type: pfam
Location: 122386 - 125181 (-)
Type: pfam
Location: 122386 - 125181 (-)
Gene ID: Rep_1793_c_13_123
Type: CAZyme
Location: 125455 - 126603 (+)
Type: CAZyme
Location: 125455 - 126603 (+)
Gene ID: Rep_1793_c_13_124
Type: TC
Location: 126873 - 128330 (+)
Type: TC
Location: 126873 - 128330 (+)
Gene ID: Rep_1793_c_13_125
Type:
Location: 128396 - 129403 (+)
Type:
Location: 128396 - 129403 (+)
Gene ID: Rep_1793_c_13_126
Type: TC
Location: 130033 - 130593 (+)
Type: TC
Location: 130033 - 130593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Murdochiella
Species
Murdochiella massiliensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.