Cluster: Rep_1776_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1776
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1776_c_23 | Rep_1776_c_23_4 | 7240 | 8364 | - | 8.A.59.4.1 |
| CAZyme | Rep_1776_c_23 | Rep_1776_c_23_5 | 8515 | 9306 | + | GT2 |
| TC | Rep_1776_c_23 | Rep_1776_c_23_6 | 9308 | 11170 | - | 8.A.59.4.1 |
| CAZyme | Rep_1776_c_23 | Rep_1776_c_23_7 | 11301 | 12428 | - | GT19 |
| pfam | Rep_1776_c_23 | Rep_1776_c_23_8 | 12425 | 13240 | - | LpxI_C | LpxI_N |
| pfam | Rep_1776_c_23 | Rep_1776_c_23_9 | 13294 | 13572 | - | TSCPD |
| TC | Rep_1776_c_23 | Rep_1776_c_23_10 | 13587 | 14597 | - | 2.A.20.1.5 |
Gene ID: Rep_1776_c_23_4
Type: TC
Location: 7240 - 8364 (-)
Type: TC
Location: 7240 - 8364 (-)
Gene ID: Rep_1776_c_23_5
Type: CAZyme
Location: 8515 - 9306 (+)
Type: CAZyme
Location: 8515 - 9306 (+)
Gene ID: Rep_1776_c_23_6
Type: TC
Location: 9308 - 11170 (-)
Type: TC
Location: 9308 - 11170 (-)
Gene ID: Rep_1776_c_23_7
Type: CAZyme
Location: 11301 - 12428 (-)
Type: CAZyme
Location: 11301 - 12428 (-)
Gene ID: Rep_1776_c_23_8
Type: pfam
Location: 12425 - 13240 (-)
Type: pfam
Location: 12425 - 13240 (-)
Gene ID: Rep_1776_c_23_9
Type: pfam
Location: 13294 - 13572 (-)
Type: pfam
Location: 13294 - 13572 (-)
Gene ID: Rep_1776_c_23_10
Type: TC
Location: 13587 - 14597 (-)
Type: TC
Location: 13587 - 14597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Avigastranaerophilus
Species
Avigastranaerophilus sp944322615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.