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Cluster: Rep_170_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_170_c_107 Rep_170_c_107_2 236 892 + 1.C.113.1.3
pfam Rep_170_c_107 Rep_170_c_107_3 976 1584 + RuvA_N | RuvA_C | HHH_5
TC Rep_170_c_107 Rep_170_c_107_4 1616 9109 + 9.A.25.1.1
TC Rep_170_c_107 Rep_170_c_107_5 9346 11415 - 1.B.6.1.1
peptidase Rep_170_c_107 Rep_170_c_107_6 11515 11868 - I39.UPW
TC Rep_170_c_107 Rep_170_c_107_7 11885 14008 - 3.A.7.7.1
pfam Rep_170_c_107 Rep_170_c_107_8 14170 14805 - LUD_dom
pfam Rep_170_c_107 Rep_170_c_107_9 14870 15712 - SpoU_methylase
CAZyme Rep_170_c_107 Rep_170_c_107_10 16437 18761 + GH105 | GH154
CAZyme Rep_170_c_107 Rep_170_c_107_11 18814 20676 + PL33_1
CAZyme Rep_170_c_107 Rep_170_c_107_12 20704 23034 + GH35
Gene ID: Rep_170_c_107_2
Type: TC
Location: 236 - 892 (+)
Gene ID: Rep_170_c_107_3
Type: pfam
Location: 976 - 1584 (+)
Gene ID: Rep_170_c_107_4
Type: TC
Location: 1616 - 9109 (+)
Gene ID: Rep_170_c_107_5
Type: TC
Location: 9346 - 11415 (-)
Gene ID: Rep_170_c_107_6
Type: peptidase
Location: 11515 - 11868 (-)
Gene ID: Rep_170_c_107_7
Type: TC
Location: 11885 - 14008 (-)
Gene ID: Rep_170_c_107_8
Type: pfam
Location: 14170 - 14805 (-)
Gene ID: Rep_170_c_107_9
Type: pfam
Location: 14870 - 15712 (-)
Gene ID: Rep_170_c_107_10
Type: CAZyme
Location: 16437 - 18761 (+)
Gene ID: Rep_170_c_107_11
Type: CAZyme
Location: 18814 - 20676 (+)
Gene ID: Rep_170_c_107_12
Type: CAZyme
Location: 20704 - 23034 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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