Cluster: Rep_1707_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1707
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1707_c_18 | Rep_1707_c_18_43 | 47874 | 49571 | + | 3.A.1.1.22 |
| NULL(UNKNOWN) | Rep_1707_c_18 | Rep_1707_c_18_44 | 49571 | 50899 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_1707_c_18 | Rep_1707_c_18_45 | 50905 | 51756 | - | HTH_AraC | HTH_AraC |
| TC | Rep_1707_c_18 | Rep_1707_c_18_46 | 51871 | 52842 | + | 3.A.1.1.10 |
| TC | Rep_1707_c_18 | Rep_1707_c_18_47 | 52836 | 53711 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | Rep_1707_c_18 | Rep_1707_c_18_48 | 53725 | 55470 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1707_c_18 | Rep_1707_c_18_49 | 55470 | 57659 | + | GH110 |
| CAZyme | Rep_1707_c_18 | Rep_1707_c_18_50 | 57661 | 60654 | + | GH110 |
| pfam | Rep_1707_c_18 | Rep_1707_c_18_51 | 60704 | 63118 | + | Big_2 | Big_2 |
| NULL(UNKNOWN) | Rep_1707_c_18 | Rep_1707_c_18_52 | 63177 | 64640 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1707_c_18 | Rep_1707_c_18_53 | 64646 | 66913 | + | GH78 |
Gene ID: Rep_1707_c_18_43
Type: TC
Location: 47874 - 49571 (+)
Type: TC
Location: 47874 - 49571 (+)
Gene ID: Rep_1707_c_18_44
Type:
Location: 49571 - 50899 (+)
Type:
Location: 49571 - 50899 (+)
Gene ID: Rep_1707_c_18_45
Type: TF
Location: 50905 - 51756 (-)
Type: TF
Location: 50905 - 51756 (-)
Gene ID: Rep_1707_c_18_46
Type: TC
Location: 51871 - 52842 (+)
Type: TC
Location: 51871 - 52842 (+)
Gene ID: Rep_1707_c_18_47
Type: TC
Location: 52836 - 53711 (+)
Type: TC
Location: 52836 - 53711 (+)
Gene ID: Rep_1707_c_18_48
Type:
Location: 53725 - 55470 (+)
Type:
Location: 53725 - 55470 (+)
Gene ID: Rep_1707_c_18_49
Type: CAZyme
Location: 55470 - 57659 (+)
Type: CAZyme
Location: 55470 - 57659 (+)
Gene ID: Rep_1707_c_18_50
Type: CAZyme
Location: 57661 - 60654 (+)
Type: CAZyme
Location: 57661 - 60654 (+)
Gene ID: Rep_1707_c_18_51
Type: pfam
Location: 60704 - 63118 (+)
Type: pfam
Location: 60704 - 63118 (+)
Gene ID: Rep_1707_c_18_52
Type:
Location: 63177 - 64640 (+)
Type:
Location: 63177 - 64640 (+)
Gene ID: Rep_1707_c_18_53
Type: CAZyme
Location: 64646 - 66913 (+)
Type: CAZyme
Location: 64646 - 66913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
Onthovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.