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Cluster: Rep_1707_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1707_c_14 Rep_1707_c_14_92 88510 89679 - GT4
pfam Rep_1707_c_14 Rep_1707_c_14_93 89657 90991 - LPG_synthase_TM
TC Rep_1707_c_14 Rep_1707_c_14_94 91093 92016 - 3.A.1.3.20
TC Rep_1707_c_14 Rep_1707_c_14_95 92016 92798 - 3.A.1.3.20
STP Rep_1707_c_14 Rep_1707_c_14_96 92802 93704 - SBP_bac_3
TC Rep_1707_c_14 Rep_1707_c_14_97 94108 95484 - 3.A.1.5.19
TC Rep_1707_c_14 Rep_1707_c_14_98 95488 97479 - 3.A.1.5.25
TC Rep_1707_c_14 Rep_1707_c_14_99 97481 99466 - 3.A.1.5.19
TC Rep_1707_c_14 Rep_1707_c_14_100 99468 100517 - 3.A.1.5.19
Gene ID: Rep_1707_c_14_92
Type: CAZyme
Location: 88510 - 89679 (-)
Gene ID: Rep_1707_c_14_93
Type: pfam
Location: 89657 - 90991 (-)
Gene ID: Rep_1707_c_14_94
Type: TC
Location: 91093 - 92016 (-)
Gene ID: Rep_1707_c_14_95
Type: TC
Location: 92016 - 92798 (-)
Gene ID: Rep_1707_c_14_96
Type: STP
Location: 92802 - 93704 (-)
Gene ID: Rep_1707_c_14_97
Type: TC
Location: 94108 - 95484 (-)
Gene ID: Rep_1707_c_14_98
Type: TC
Location: 95488 - 97479 (-)
Gene ID: Rep_1707_c_14_99
Type: TC
Location: 97481 - 99466 (-)
Gene ID: Rep_1707_c_14_100
Type: TC
Location: 99468 - 100517 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
Onthovivens
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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