Cluster: Rep_1707_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1707
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1707_c_10 | Rep_1707_c_10_8 | 6091 | 7605 | + | GH77 |
| pfam | Rep_1707_c_10 | Rep_1707_c_10_9 | 7665 | 8924 | + | SBP_bac_8 |
| TC | Rep_1707_c_10 | Rep_1707_c_10_10 | 8983 | 10542 | + | 3.A.1.1.27 |
| TC | Rep_1707_c_10 | Rep_1707_c_10_11 | 10542 | 11405 | + | 3.A.1.1.27 |
| CAZyme | Rep_1707_c_10 | Rep_1707_c_10_12 | 11409 | 13025 | + | GH13_36 |
| TC | Rep_1707_c_10 | Rep_1707_c_10_13 | 13038 | 15569 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | Rep_1707_c_10 | Rep_1707_c_10_14 | 15582 | 16172 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1707_c_10 | Rep_1707_c_10_15 | 16165 | 16851 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1707_c_10 | Rep_1707_c_10_16 | 16863 | 19895 | + | GH13_14 |
| pfam | Rep_1707_c_10 | Rep_1707_c_10_17 | 19907 | 21094 | + | CBM26 |
| TF | Rep_1707_c_10 | Rep_1707_c_10_18 | 21167 | 21439 | - | HTH_3 |
| TC | Rep_1707_c_10 | Rep_1707_c_10_19 | 21559 | 22101 | + | 3.A.11.1.4 |
Gene ID: Rep_1707_c_10_8
Type: CAZyme
Location: 6091 - 7605 (+)
Type: CAZyme
Location: 6091 - 7605 (+)
Gene ID: Rep_1707_c_10_9
Type: pfam
Location: 7665 - 8924 (+)
Type: pfam
Location: 7665 - 8924 (+)
Gene ID: Rep_1707_c_10_10
Type: TC
Location: 8983 - 10542 (+)
Type: TC
Location: 8983 - 10542 (+)
Gene ID: Rep_1707_c_10_11
Type: TC
Location: 10542 - 11405 (+)
Type: TC
Location: 10542 - 11405 (+)
Gene ID: Rep_1707_c_10_12
Type: CAZyme
Location: 11409 - 13025 (+)
Type: CAZyme
Location: 11409 - 13025 (+)
Gene ID: Rep_1707_c_10_13
Type: TC
Location: 13038 - 15569 (+)
Type: TC
Location: 13038 - 15569 (+)
Gene ID: Rep_1707_c_10_14
Type:
Location: 15582 - 16172 (+)
Type:
Location: 15582 - 16172 (+)
Gene ID: Rep_1707_c_10_15
Type:
Location: 16165 - 16851 (+)
Type:
Location: 16165 - 16851 (+)
Gene ID: Rep_1707_c_10_16
Type: CAZyme
Location: 16863 - 19895 (+)
Type: CAZyme
Location: 16863 - 19895 (+)
Gene ID: Rep_1707_c_10_17
Type: pfam
Location: 19907 - 21094 (+)
Type: pfam
Location: 19907 - 21094 (+)
Gene ID: Rep_1707_c_10_18
Type: TF
Location: 21167 - 21439 (-)
Type: TF
Location: 21167 - 21439 (-)
Gene ID: Rep_1707_c_10_19
Type: TC
Location: 21559 - 22101 (+)
Type: TC
Location: 21559 - 22101 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
Onthovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.