Cluster: Rep_1702_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1702
- CGC Family ID: CGCFAM_00415
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1702_c_129 | Rep_1702_c_129_3 | 3378 | 4262 | - | 3.A.1.1.36 |
| TC | Rep_1702_c_129 | Rep_1702_c_129_4 | 4275 | 5291 | - | 3.A.1.1.34 |
| CAZyme | Rep_1702_c_129 | Rep_1702_c_129_5 | 5312 | 6694 | - | GH16 |
Gene ID: Rep_1702_c_129_3
Type: TC
Location: 3378 - 4262 (-)
Type: TC
Location: 3378 - 4262 (-)
Gene ID: Rep_1702_c_129_4
Type: TC
Location: 4275 - 5291 (-)
Type: TC
Location: 4275 - 5291 (-)
Gene ID: Rep_1702_c_129_5
Type: CAZyme
Location: 5312 - 6694 (-)
Type: CAZyme
Location: 5312 - 6694 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.