Cluster: Rep_1702_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1702
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1702_c_119 | Rep_1702_c_119_9 | 9232 | 10218 | + | 9.B.146.1.3 |
| pfam | Rep_1702_c_119 | Rep_1702_c_119_10 | 10215 | 11447 | + | Mur_ligase_M |
| TC | Rep_1702_c_119 | Rep_1702_c_119_11 | 11444 | 12538 | + | 2.A.103.1.3 |
| CAZyme | Rep_1702_c_119 | Rep_1702_c_119_12 | 12540 | 13583 | + | GT28 |
Gene ID: Rep_1702_c_119_9
Type: TC
Location: 9232 - 10218 (+)
Type: TC
Location: 9232 - 10218 (+)
Gene ID: Rep_1702_c_119_10
Type: pfam
Location: 10215 - 11447 (+)
Type: pfam
Location: 10215 - 11447 (+)
Gene ID: Rep_1702_c_119_11
Type: TC
Location: 11444 - 12538 (+)
Type: TC
Location: 11444 - 12538 (+)
Gene ID: Rep_1702_c_119_12
Type: CAZyme
Location: 12540 - 13583 (+)
Type: CAZyme
Location: 12540 - 13583 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.