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Cluster: Rep_1702_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1702_c_38 Rep_1702_c_38_1 3 1214 + 3.A.1.1.27
TC Rep_1702_c_38 Rep_1702_c_38_2 1294 3039 + 3.A.1.1.27
TC Rep_1702_c_38 Rep_1702_c_38_3 3041 3979 + 3.A.1.1.27
CAZyme Rep_1702_c_38 Rep_1702_c_38_4 3986 5539 + GH13_44
CAZyme Rep_1702_c_38 Rep_1702_c_38_5 5536 7203 + GH13_36
TC Rep_1702_c_38 Rep_1702_c_38_6 7217 9112 + 3.A.1.1.26
Gene ID: Rep_1702_c_38_1
Type: TC
Location: 3 - 1214 (+)
Gene ID: Rep_1702_c_38_2
Type: TC
Location: 1294 - 3039 (+)
Gene ID: Rep_1702_c_38_3
Type: TC
Location: 3041 - 3979 (+)
Gene ID: Rep_1702_c_38_4
Type: CAZyme
Location: 3986 - 5539 (+)
Gene ID: Rep_1702_c_38_5
Type: CAZyme
Location: 5536 - 7203 (+)
Gene ID: Rep_1702_c_38_6
Type: TC
Location: 7217 - 9112 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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