Cluster: Rep_1702_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1702
- CGC Family ID: CGCFAM_01042
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1702_c_16 | Rep_1702_c_16_4 | 3430 | 5559 | - | GH13_14 |
| peptidase | Rep_1702_c_16 | Rep_1702_c_16_5 | 5619 | 6878 | - | M16.UPB |
| peptidase | Rep_1702_c_16 | Rep_1702_c_16_6 | 6875 | 8083 | - | M16.A15 |
| TC | Rep_1702_c_16 | Rep_1702_c_16_7 | 8067 | 10061 | - | 3.A.12.1.1 |
Gene ID: Rep_1702_c_16_4
Type: CAZyme
Location: 3430 - 5559 (-)
Type: CAZyme
Location: 3430 - 5559 (-)
Gene ID: Rep_1702_c_16_5
Type: peptidase
Location: 5619 - 6878 (-)
Type: peptidase
Location: 5619 - 6878 (-)
Gene ID: Rep_1702_c_16_6
Type: peptidase
Location: 6875 - 8083 (-)
Type: peptidase
Location: 6875 - 8083 (-)
Gene ID: Rep_1702_c_16_7
Type: TC
Location: 8067 - 10061 (-)
Type: TC
Location: 8067 - 10061 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.