Cluster: Rep_1701_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_10663
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1701_c_10 | Rep_1701_c_10_109 | 127049 | 127939 | - | 3.A.1.1.34 |
| pfam | Rep_1701_c_10 | Rep_1701_c_10_110 | 127954 | 128964 | - | BPD_transp_1 |
| CAZyme | Rep_1701_c_10 | Rep_1701_c_10_111 | 128981 | 130336 | - | GH16 |
Gene ID: Rep_1701_c_10_109
Type: TC
Location: 127049 - 127939 (-)
Type: TC
Location: 127049 - 127939 (-)
Gene ID: Rep_1701_c_10_110
Type: pfam
Location: 127954 - 128964 (-)
Type: pfam
Location: 127954 - 128964 (-)
Gene ID: Rep_1701_c_10_111
Type: CAZyme
Location: 128981 - 130336 (-)
Type: CAZyme
Location: 128981 - 130336 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.