Cluster: Rep_1701_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_01469
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1701_c_10 | Rep_1701_c_10_97 | 107655 | 110447 | - | GH84 |
| pfam | Rep_1701_c_10 | Rep_1701_c_10_98 | 110464 | 111957 | - | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| CAZyme | Rep_1701_c_10 | Rep_1701_c_10_99 | 111960 | 113099 | - | CE9 |
| sulfatase | Rep_1701_c_10 | Rep_1701_c_10_100 | 113113 | 113844 | - | S1_9 |
| CAZyme | Rep_1701_c_10 | Rep_1701_c_10_101 | 113857 | 116403 | - | GH94 |
| pfam | Rep_1701_c_10 | Rep_1701_c_10_102 | 116414 | 117829 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_1701_c_10 | Rep_1701_c_10_103 | 117848 | 118357 | - | GH16_21 |
| pfam | Rep_1701_c_10 | Rep_1701_c_10_104 | 118405 | 120150 | - | MBG_3 | MBG_3 |
| TC | Rep_1701_c_10 | Rep_1701_c_10_105 | 120166 | 121302 | - | 3.A.1.1.26 |
Gene ID: Rep_1701_c_10_97
Type: CAZyme
Location: 107655 - 110447 (-)
Type: CAZyme
Location: 107655 - 110447 (-)
Gene ID: Rep_1701_c_10_98
Type: pfam
Location: 110464 - 111957 (-)
Type: pfam
Location: 110464 - 111957 (-)
Gene ID: Rep_1701_c_10_99
Type: CAZyme
Location: 111960 - 113099 (-)
Type: CAZyme
Location: 111960 - 113099 (-)
Gene ID: Rep_1701_c_10_100
Type: sulfatase
Location: 113113 - 113844 (-)
Type: sulfatase
Location: 113113 - 113844 (-)
Gene ID: Rep_1701_c_10_101
Type: CAZyme
Location: 113857 - 116403 (-)
Type: CAZyme
Location: 113857 - 116403 (-)
Gene ID: Rep_1701_c_10_102
Type: pfam
Location: 116414 - 117829 (-)
Type: pfam
Location: 116414 - 117829 (-)
Gene ID: Rep_1701_c_10_103
Type: CAZyme
Location: 117848 - 118357 (-)
Type: CAZyme
Location: 117848 - 118357 (-)
Gene ID: Rep_1701_c_10_104
Type: pfam
Location: 118405 - 120150 (-)
Type: pfam
Location: 118405 - 120150 (-)
Gene ID: Rep_1701_c_10_105
Type: TC
Location: 120166 - 121302 (-)
Type: TC
Location: 120166 - 121302 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.