Cluster: Rep_1701_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_11236
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1701_c_8 | Rep_1701_c_8_25 | 25985 | 27970 | - | 9.A.8.1.9 |
| STP | Rep_1701_c_8 | Rep_1701_c_8_26 | 27967 | 28254 | - | FeoA |
| CAZyme | Rep_1701_c_8 | Rep_1701_c_8_27 | 28328 | 30055 | + | CBM34 | GH13_20 |
| TC | Rep_1701_c_8 | Rep_1701_c_8_28 | 30072 | 31793 | - | 3.A.1.135.5 |
Gene ID: Rep_1701_c_8_25
Type: TC
Location: 25985 - 27970 (-)
Type: TC
Location: 25985 - 27970 (-)
Gene ID: Rep_1701_c_8_26
Type: STP
Location: 27967 - 28254 (-)
Type: STP
Location: 27967 - 28254 (-)
Gene ID: Rep_1701_c_8_27
Type: CAZyme
Location: 28328 - 30055 (+)
Type: CAZyme
Location: 28328 - 30055 (+)
Gene ID: Rep_1701_c_8_28
Type: TC
Location: 30072 - 31793 (-)
Type: TC
Location: 30072 - 31793 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.