Cluster: Rep_1701_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1701_c_7 | Rep_1701_c_7_22 | 23226 | 24269 | - | GT28 |
| TC | Rep_1701_c_7 | Rep_1701_c_7_23 | 24271 | 25365 | - | 2.A.103.1.3 |
| pfam | Rep_1701_c_7 | Rep_1701_c_7_24 | 25362 | 26594 | - | Mur_ligase_M |
| TC | Rep_1701_c_7 | Rep_1701_c_7_25 | 26591 | 27577 | - | 9.B.146.1.3 |
Gene ID: Rep_1701_c_7_22
Type: CAZyme
Location: 23226 - 24269 (-)
Type: CAZyme
Location: 23226 - 24269 (-)
Gene ID: Rep_1701_c_7_23
Type: TC
Location: 24271 - 25365 (-)
Type: TC
Location: 24271 - 25365 (-)
Gene ID: Rep_1701_c_7_24
Type: pfam
Location: 25362 - 26594 (-)
Type: pfam
Location: 25362 - 26594 (-)
Gene ID: Rep_1701_c_7_25
Type: TC
Location: 26591 - 27577 (-)
Type: TC
Location: 26591 - 27577 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.