Cluster: Rep_1701_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1701_c_4 | Rep_1701_c_4_2 | 759 | 3593 | - | GH13_14 |
| pfam | Rep_1701_c_4 | Rep_1701_c_4_3 | 3677 | 4789 | - | Flg_new |
| pfam | Rep_1701_c_4 | Rep_1701_c_4_4 | 5145 | 5795 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | Rep_1701_c_4 | Rep_1701_c_4_5 | 5800 | 8502 | - | 3.A.1.122.13 |
Gene ID: Rep_1701_c_4_2
Type: CAZyme
Location: 759 - 3593 (-)
Type: CAZyme
Location: 759 - 3593 (-)
Gene ID: Rep_1701_c_4_3
Type: pfam
Location: 3677 - 4789 (-)
Type: pfam
Location: 3677 - 4789 (-)
Gene ID: Rep_1701_c_4_4
Type: pfam
Location: 5145 - 5795 (-)
Type: pfam
Location: 5145 - 5795 (-)
Gene ID: Rep_1701_c_4_5
Type: TC
Location: 5800 - 8502 (-)
Type: TC
Location: 5800 - 8502 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.