Cluster: Rep_1701_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_01042
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1701_c_29 | Rep_1701_c_29_44 | 56854 | 59316 | + | 3.A.12.1.1 |
| peptidase | Rep_1701_c_29 | Rep_1701_c_29_45 | 59309 | 60508 | + | M16.UNW |
| peptidase | Rep_1701_c_29 | Rep_1701_c_29_46 | 60505 | 61767 | + | M16.UPB |
| CAZyme | Rep_1701_c_29 | Rep_1701_c_29_47 | 61827 | 63956 | + | GH13_14 |
Gene ID: Rep_1701_c_29_44
Type: TC
Location: 56854 - 59316 (+)
Type: TC
Location: 56854 - 59316 (+)
Gene ID: Rep_1701_c_29_45
Type: peptidase
Location: 59309 - 60508 (+)
Type: peptidase
Location: 59309 - 60508 (+)
Gene ID: Rep_1701_c_29_46
Type: peptidase
Location: 60505 - 61767 (+)
Type: peptidase
Location: 60505 - 61767 (+)
Gene ID: Rep_1701_c_29_47
Type: CAZyme
Location: 61827 - 63956 (+)
Type: CAZyme
Location: 61827 - 63956 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.