Cluster: Rep_1701_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_00097
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1701_c_29 | Rep_1701_c_29_2 | 1810 | 2760 | + | 3.A.1.1.20 |
| TC | Rep_1701_c_29 | Rep_1701_c_29_3 | 2773 | 3684 | + | 3.A.1.1.34 |
| CAZyme | Rep_1701_c_29 | Rep_1701_c_29_4 | 3700 | 6111 | + | GH32 |
| CAZyme | Rep_1701_c_29 | Rep_1701_c_29_5 | 6122 | 8188 | + | CBM38 | GH32 |
| CAZyme | Rep_1701_c_29 | Rep_1701_c_29_6 | 8202 | 9674 | + | GH32 |
| CAZyme | Rep_1701_c_29 | Rep_1701_c_29_7 | 9671 | 11914 | + | CBM38 | CBM38 |
Gene ID: Rep_1701_c_29_2
Type: TC
Location: 1810 - 2760 (+)
Type: TC
Location: 1810 - 2760 (+)
Gene ID: Rep_1701_c_29_3
Type: TC
Location: 2773 - 3684 (+)
Type: TC
Location: 2773 - 3684 (+)
Gene ID: Rep_1701_c_29_4
Type: CAZyme
Location: 3700 - 6111 (+)
Type: CAZyme
Location: 3700 - 6111 (+)
Gene ID: Rep_1701_c_29_5
Type: CAZyme
Location: 6122 - 8188 (+)
Type: CAZyme
Location: 6122 - 8188 (+)
Gene ID: Rep_1701_c_29_6
Type: CAZyme
Location: 8202 - 9674 (+)
Type: CAZyme
Location: 8202 - 9674 (+)
Gene ID: Rep_1701_c_29_7
Type: CAZyme
Location: 9671 - 11914 (+)
Type: CAZyme
Location: 9671 - 11914 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.