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Cluster: Rep_1701_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1701_c_26 Rep_1701_c_26_13 11909 14194 + GH65
CAZyme Rep_1701_c_26 Rep_1701_c_26_14 14181 15755 + GH28
CAZyme Rep_1701_c_26 Rep_1701_c_26_15 15923 18550 + GH28
NULL(UNKNOWN) Rep_1701_c_26 Rep_1701_c_26_16 18577 21087 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1701_c_26 Rep_1701_c_26_17 21171 22571 + SBP_bac_8
TC Rep_1701_c_26 Rep_1701_c_26_18 22577 23509 + 3.A.1.1.5
TC Rep_1701_c_26 Rep_1701_c_26_19 23493 24431 + 3.A.1.1.36
CAZyme Rep_1701_c_26 Rep_1701_c_26_20 24428 26560 + GH65
TC Rep_1701_c_26 Rep_1701_c_26_21 26553 28337 + 3.A.1.1.22
Gene ID: Rep_1701_c_26_13
Type: CAZyme
Location: 11909 - 14194 (+)
Gene ID: Rep_1701_c_26_14
Type: CAZyme
Location: 14181 - 15755 (+)
Gene ID: Rep_1701_c_26_15
Type: CAZyme
Location: 15923 - 18550 (+)
Gene ID: Rep_1701_c_26_16
Type:
Location: 18577 - 21087 (+)
Gene ID: Rep_1701_c_26_17
Type: pfam
Location: 21171 - 22571 (+)
Gene ID: Rep_1701_c_26_18
Type: TC
Location: 22577 - 23509 (+)
Gene ID: Rep_1701_c_26_19
Type: TC
Location: 23493 - 24431 (+)
Gene ID: Rep_1701_c_26_20
Type: CAZyme
Location: 24428 - 26560 (+)
Gene ID: Rep_1701_c_26_21
Type: TC
Location: 26553 - 28337 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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