Cluster: Rep_1701_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1701
- CGC Family ID: CGCFAM_01091
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1701_c_17 | Rep_1701_c_17_33 | 19686 | 21179 | - | 2.A.66.2.16 |
| pfam | Rep_1701_c_17 | Rep_1701_c_17_34 | 21347 | 22579 | + | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_4_4 | Glyco_trans_1_4 |
| pfam | Rep_1701_c_17 | Rep_1701_c_17_35 | 22477 | 23667 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_1701_c_17 | Rep_1701_c_17_36 | 23670 | 24761 | - | GT4 |
Gene ID: Rep_1701_c_17_33
Type: TC
Location: 19686 - 21179 (-)
Type: TC
Location: 19686 - 21179 (-)
Gene ID: Rep_1701_c_17_34
Type: pfam
Location: 21347 - 22579 (+)
Type: pfam
Location: 21347 - 22579 (+)
Gene ID: Rep_1701_c_17_35
Type: pfam
Location: 22477 - 23667 (-)
Type: pfam
Location: 22477 - 23667 (-)
Gene ID: Rep_1701_c_17_36
Type: CAZyme
Location: 23670 - 24761 (-)
Type: CAZyme
Location: 23670 - 24761 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.