Cluster: Rep_1692_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1692
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1692_c_0 | Rep_1692_c_0_1293 | 1381341 | 1382765 | + | 1.A.26.1.2 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1294 | 1382839 | 1383588 | + | 3.A.1.17.8 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1295 | 1383578 | 1384390 | + | 3.A.1.17.3 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_1296 | 1384332 | 1385384 | + | NMT1 | NMT1_2 |
| peptidase | Rep_1692_c_0 | Rep_1692_c_0_1297 | 1385459 | 1386919 | - | C69.UPW |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1298 | 1387002 | 1388852 | - | 3.A.1.1.22 |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_1299 | 1388849 | 1390981 | - | GH65 |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_1300 | 1390986 | 1393259 | - | GH65 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1301 | 1393264 | 1394160 | - | 3.A.1.1.39 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1302 | 1394157 | 1395134 | - | 3.A.1.1.20 |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1303 | 1395154 | 1396563 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1304 | 1396754 | 1397698 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1305 | 1397688 | 1398923 | - | 8.A.59.2.1 |
Gene ID: Rep_1692_c_0_1293
Type: TC
Location: 1381341 - 1382765 (+)
Type: TC
Location: 1381341 - 1382765 (+)
Gene ID: Rep_1692_c_0_1294
Type: TC
Location: 1382839 - 1383588 (+)
Type: TC
Location: 1382839 - 1383588 (+)
Gene ID: Rep_1692_c_0_1295
Type: TC
Location: 1383578 - 1384390 (+)
Type: TC
Location: 1383578 - 1384390 (+)
Gene ID: Rep_1692_c_0_1296
Type: pfam
Location: 1384332 - 1385384 (+)
Type: pfam
Location: 1384332 - 1385384 (+)
Gene ID: Rep_1692_c_0_1297
Type: peptidase
Location: 1385459 - 1386919 (-)
Type: peptidase
Location: 1385459 - 1386919 (-)
Gene ID: Rep_1692_c_0_1298
Type: TC
Location: 1387002 - 1388852 (-)
Type: TC
Location: 1387002 - 1388852 (-)
Gene ID: Rep_1692_c_0_1299
Type: CAZyme
Location: 1388849 - 1390981 (-)
Type: CAZyme
Location: 1388849 - 1390981 (-)
Gene ID: Rep_1692_c_0_1300
Type: CAZyme
Location: 1390986 - 1393259 (-)
Type: CAZyme
Location: 1390986 - 1393259 (-)
Gene ID: Rep_1692_c_0_1301
Type: TC
Location: 1393264 - 1394160 (-)
Type: TC
Location: 1393264 - 1394160 (-)
Gene ID: Rep_1692_c_0_1302
Type: TC
Location: 1394157 - 1395134 (-)
Type: TC
Location: 1394157 - 1395134 (-)
Gene ID: Rep_1692_c_0_1303
Type:
Location: 1395154 - 1396563 (-)
Type:
Location: 1395154 - 1396563 (-)
Gene ID: Rep_1692_c_0_1304
Type:
Location: 1396754 - 1397698 (+)
Type:
Location: 1396754 - 1397698 (+)
Gene ID: Rep_1692_c_0_1305
Type: TC
Location: 1397688 - 1398923 (-)
Type: TC
Location: 1397688 - 1398923 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.