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Cluster: Rep_1692_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1692_c_0 Rep_1692_c_0_1055 1141053 1142348 - 3.A.1.1.26
pfam Rep_1692_c_0 Rep_1692_c_0_1056 1142674 1143903 + SBP_bac_1 | SBP_bac_8
TC Rep_1692_c_0 Rep_1692_c_0_1057 1143906 1144838 + 3.A.1.1.20
TC Rep_1692_c_0 Rep_1692_c_0_1058 1144801 1145700 + 3.A.1.1.20
NULL(UNKNOWN) Rep_1692_c_0 Rep_1692_c_0_1059 1145715 1147427 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1692_c_0 Rep_1692_c_0_1060 1147432 1148706 + GH125
CAZyme Rep_1692_c_0 Rep_1692_c_0_1061 1148706 1150001 + GH76
CAZyme Rep_1692_c_0 Rep_1692_c_0_1062 1150018 1152969 + GH38
Gene ID: Rep_1692_c_0_1055
Type: TC
Location: 1141053 - 1142348 (-)
Gene ID: Rep_1692_c_0_1056
Type: pfam
Location: 1142674 - 1143903 (+)
Gene ID: Rep_1692_c_0_1057
Type: TC
Location: 1143906 - 1144838 (+)
Gene ID: Rep_1692_c_0_1058
Type: TC
Location: 1144801 - 1145700 (+)
Gene ID: Rep_1692_c_0_1059
Type:
Location: 1145715 - 1147427 (+)
Gene ID: Rep_1692_c_0_1060
Type: CAZyme
Location: 1147432 - 1148706 (+)
Gene ID: Rep_1692_c_0_1061
Type: CAZyme
Location: 1148706 - 1150001 (+)
Gene ID: Rep_1692_c_0_1062
Type: CAZyme
Location: 1150018 - 1152969 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-288
→
Genus
CAG-288
→
Species
CAG-288 sp000437395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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