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Cluster: Rep_1692_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1692_c_0 Rep_1692_c_0_958 1039856 1041754 - 3.A.1.106.3
TC Rep_1692_c_0 Rep_1692_c_0_959 1041763 1043562 - 3.A.1.106.2
TC Rep_1692_c_0 Rep_1692_c_0_960 1044001 1045206 + 3.A.1.11.8
TC Rep_1692_c_0 Rep_1692_c_0_961 1045208 1046140 + 3.A.1.11.2
TC Rep_1692_c_0 Rep_1692_c_0_962 1046137 1047015 + 3.A.1.11.8
TC Rep_1692_c_0 Rep_1692_c_0_963 1047012 1048190 + 3.A.1.11.7
pfam Rep_1692_c_0 Rep_1692_c_0_964 1048196 1048858 + Hydrolase | HAD | HAD_2
pfam Rep_1692_c_0 Rep_1692_c_0_965 1049354 1050631 + SBP_bac_8
TC Rep_1692_c_0 Rep_1692_c_0_966 1050730 1052283 + 3.A.1.1.27
TC Rep_1692_c_0 Rep_1692_c_0_967 1052283 1053146 + 3.A.1.1.27
CAZyme Rep_1692_c_0 Rep_1692_c_0_968 1053149 1054729 + GH13_36
TC Rep_1692_c_0 Rep_1692_c_0_969 1054742 1057297 + 3.A.1.1.26
Gene ID: Rep_1692_c_0_958
Type: TC
Location: 1039856 - 1041754 (-)
Gene ID: Rep_1692_c_0_959
Type: TC
Location: 1041763 - 1043562 (-)
Gene ID: Rep_1692_c_0_960
Type: TC
Location: 1044001 - 1045206 (+)
Gene ID: Rep_1692_c_0_961
Type: TC
Location: 1045208 - 1046140 (+)
Gene ID: Rep_1692_c_0_962
Type: TC
Location: 1046137 - 1047015 (+)
Gene ID: Rep_1692_c_0_963
Type: TC
Location: 1047012 - 1048190 (+)
Gene ID: Rep_1692_c_0_964
Type: pfam
Location: 1048196 - 1048858 (+)
Gene ID: Rep_1692_c_0_965
Type: pfam
Location: 1049354 - 1050631 (+)
Gene ID: Rep_1692_c_0_966
Type: TC
Location: 1050730 - 1052283 (+)
Gene ID: Rep_1692_c_0_967
Type: TC
Location: 1052283 - 1053146 (+)
Gene ID: Rep_1692_c_0_968
Type: CAZyme
Location: 1053149 - 1054729 (+)
Gene ID: Rep_1692_c_0_969
Type: TC
Location: 1054742 - 1057297 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-288
→
Genus
CAG-288
→
Species
CAG-288 sp000437395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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