Cluster: Rep_1692_CGC4
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1692
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1692_c_0 | Rep_1692_c_0_565 | 634373 | 635485 | + | 3.A.1.1.22 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_566 | 635781 | 637319 | + | 2.A.38.1.4 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_567 | 637324 | 637758 | + | TrkA_N |
| STP | Rep_1692_c_0 | Rep_1692_c_0_568 | 637763 | 638425 | + | TrkA_C |
| TC | Rep_1692_c_0 | Rep_1692_c_0_569 | 638422 | 640344 | + | 3.A.1.120.4 |
| STP | Rep_1692_c_0 | Rep_1692_c_0_570 | 640433 | 641113 | + | HD |
| STP | Rep_1692_c_0 | Rep_1692_c_0_571 | 641220 | 641783 | - | TetR_N |
| TC | Rep_1692_c_0 | Rep_1692_c_0_572 | 641956 | 642900 | + | 3.A.1.126.1 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_573 | 642900 | 643814 | + | 3.A.1.126.1 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_574 | 643816 | 645726 | + | ABC2_membrane_2 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_575 | 645935 | 646771 | + | 9.B.169.2.2 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_576 | 646780 | 648366 | + | 4.C.1.1.16 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_577 | 648402 | 649181 | - | Acyltransferase |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_578 | 649194 | 651329 | - | GH13_14 |
Gene ID: Rep_1692_c_0_565
Type: TC
Location: 634373 - 635485 (+)
Type: TC
Location: 634373 - 635485 (+)
Gene ID: Rep_1692_c_0_566
Type: TC
Location: 635781 - 637319 (+)
Type: TC
Location: 635781 - 637319 (+)
Gene ID: Rep_1692_c_0_567
Type: pfam
Location: 637324 - 637758 (+)
Type: pfam
Location: 637324 - 637758 (+)
Gene ID: Rep_1692_c_0_568
Type: STP
Location: 637763 - 638425 (+)
Type: STP
Location: 637763 - 638425 (+)
Gene ID: Rep_1692_c_0_569
Type: TC
Location: 638422 - 640344 (+)
Type: TC
Location: 638422 - 640344 (+)
Gene ID: Rep_1692_c_0_570
Type: STP
Location: 640433 - 641113 (+)
Type: STP
Location: 640433 - 641113 (+)
Gene ID: Rep_1692_c_0_571
Type: STP
Location: 641220 - 641783 (-)
Type: STP
Location: 641220 - 641783 (-)
Gene ID: Rep_1692_c_0_572
Type: TC
Location: 641956 - 642900 (+)
Type: TC
Location: 641956 - 642900 (+)
Gene ID: Rep_1692_c_0_573
Type: TC
Location: 642900 - 643814 (+)
Type: TC
Location: 642900 - 643814 (+)
Gene ID: Rep_1692_c_0_574
Type: pfam
Location: 643816 - 645726 (+)
Type: pfam
Location: 643816 - 645726 (+)
Gene ID: Rep_1692_c_0_575
Type: TC
Location: 645935 - 646771 (+)
Type: TC
Location: 645935 - 646771 (+)
Gene ID: Rep_1692_c_0_576
Type: TC
Location: 646780 - 648366 (+)
Type: TC
Location: 646780 - 648366 (+)
Gene ID: Rep_1692_c_0_577
Type: pfam
Location: 648402 - 649181 (-)
Type: pfam
Location: 648402 - 649181 (-)
Gene ID: Rep_1692_c_0_578
Type: CAZyme
Location: 649194 - 651329 (-)
Type: CAZyme
Location: 649194 - 651329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.