Cluster: Rep_1692_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: Rep_1692
- CGC Family ID: CGCFAM_00037
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1692_c_0 | Rep_1692_c_0_196 | 204883 | 206580 | - | 3.A.1.1.22 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_197 | 206590 | 207429 | - | 3.A.1.1.27 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_198 | 207426 | 208805 | - | 3.A.1.1.27 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_199 | 208780 | 210207 | - | 3.A.1.1.26 |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_200 | 210222 | 211919 | - | GH13_20 |
Gene ID: Rep_1692_c_0_196
Type: TC
Location: 204883 - 206580 (-)
Type: TC
Location: 204883 - 206580 (-)
Gene ID: Rep_1692_c_0_197
Type: TC
Location: 206590 - 207429 (-)
Type: TC
Location: 206590 - 207429 (-)
Gene ID: Rep_1692_c_0_198
Type: TC
Location: 207426 - 208805 (-)
Type: TC
Location: 207426 - 208805 (-)
Gene ID: Rep_1692_c_0_199
Type: TC
Location: 208780 - 210207 (-)
Type: TC
Location: 208780 - 210207 (-)
Gene ID: Rep_1692_c_0_200
Type: CAZyme
Location: 210222 - 211919 (-)
Type: CAZyme
Location: 210222 - 211919 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.