Cluster: Rep_1692_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1692
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1692_c_0 | Rep_1692_c_0_161 | 165180 | 167234 | - | 3.A.3.6.10 |
| TF | Rep_1692_c_0 | Rep_1692_c_0_162 | 167236 | 167607 | - | HTH_5 |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_163 | 167758 | 168729 | + | GT2 |
Gene ID: Rep_1692_c_0_161
Type: TC
Location: 165180 - 167234 (-)
Type: TC
Location: 165180 - 167234 (-)
Gene ID: Rep_1692_c_0_162
Type: TF
Location: 167236 - 167607 (-)
Type: TF
Location: 167236 - 167607 (-)
Gene ID: Rep_1692_c_0_163
Type: CAZyme
Location: 167758 - 168729 (+)
Type: CAZyme
Location: 167758 - 168729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.