Cluster: Rep_1692_CGC10
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1692
- CGC Family ID: CGCFAM_01469
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1692_c_0 | Rep_1692_c_0_1354 | 1464729 | 1467107 | - | 8.A.59.4.2 |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1355 | 1467444 | 1468472 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1356 | 1468472 | 1469275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_1357 | 1469357 | 1470484 | - | CE9 |
| sulfatase | Rep_1692_c_0 | Rep_1692_c_0_1358 | 1470486 | 1470971 | - | S1_9 |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1359 | 1471022 | 1471216 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_1360 | 1471234 | 1473774 | - | GH94 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_1361 | 1473777 | 1475210 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_1362 | 1475789 | 1477687 | - | Big_3 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1363 | 1477703 | 1478839 | - | 3.A.1.1.26 |
| TF | Rep_1692_c_0 | Rep_1692_c_0_1364 | 1478895 | 1480052 | - | 0040266 |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_1365 | 1480064 | 1483093 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1366 | 1483095 | 1483988 | - | 3.A.1.1.10 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1367 | 1483999 | 1484991 | - | 3.A.1.1.6 |
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_1368 | 1485003 | 1486400 | - | GH16 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1369 | 1486609 | 1488069 | + | 3.A.1.1.18 |
| TC | Rep_1692_c_0 | Rep_1692_c_0_1370 | 1488179 | 1489765 | - | 3.A.1.121.4 |
Gene ID: Rep_1692_c_0_1354
Type: TC
Location: 1464729 - 1467107 (-)
Type: TC
Location: 1464729 - 1467107 (-)
Gene ID: Rep_1692_c_0_1355
Type:
Location: 1467444 - 1468472 (+)
Type:
Location: 1467444 - 1468472 (+)
Gene ID: Rep_1692_c_0_1356
Type:
Location: 1468472 - 1469275 (+)
Type:
Location: 1468472 - 1469275 (+)
Gene ID: Rep_1692_c_0_1357
Type: CAZyme
Location: 1469357 - 1470484 (-)
Type: CAZyme
Location: 1469357 - 1470484 (-)
Gene ID: Rep_1692_c_0_1358
Type: sulfatase
Location: 1470486 - 1470971 (-)
Type: sulfatase
Location: 1470486 - 1470971 (-)
Gene ID: Rep_1692_c_0_1359
Type:
Location: 1471022 - 1471216 (-)
Type:
Location: 1471022 - 1471216 (-)
Gene ID: Rep_1692_c_0_1360
Type: CAZyme
Location: 1471234 - 1473774 (-)
Type: CAZyme
Location: 1471234 - 1473774 (-)
Gene ID: Rep_1692_c_0_1361
Type: pfam
Location: 1473777 - 1475210 (-)
Type: pfam
Location: 1473777 - 1475210 (-)
Gene ID: Rep_1692_c_0_1362
Type: pfam
Location: 1475789 - 1477687 (-)
Type: pfam
Location: 1475789 - 1477687 (-)
Gene ID: Rep_1692_c_0_1363
Type: TC
Location: 1477703 - 1478839 (-)
Type: TC
Location: 1477703 - 1478839 (-)
Gene ID: Rep_1692_c_0_1364
Type: TF
Location: 1478895 - 1480052 (-)
Type: TF
Location: 1478895 - 1480052 (-)
Gene ID: Rep_1692_c_0_1365
Type:
Location: 1480064 - 1483093 (-)
Type:
Location: 1480064 - 1483093 (-)
Gene ID: Rep_1692_c_0_1366
Type: TC
Location: 1483095 - 1483988 (-)
Type: TC
Location: 1483095 - 1483988 (-)
Gene ID: Rep_1692_c_0_1367
Type: TC
Location: 1483999 - 1484991 (-)
Type: TC
Location: 1483999 - 1484991 (-)
Gene ID: Rep_1692_c_0_1368
Type: CAZyme
Location: 1485003 - 1486400 (-)
Type: CAZyme
Location: 1485003 - 1486400 (-)
Gene ID: Rep_1692_c_0_1369
Type: TC
Location: 1486609 - 1488069 (+)
Type: TC
Location: 1486609 - 1488069 (+)
Gene ID: Rep_1692_c_0_1370
Type: TC
Location: 1488179 - 1489765 (-)
Type: TC
Location: 1488179 - 1489765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.