Cluster: Rep_1692_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1692
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1692_c_0 | Rep_1692_c_0_35 | 31547 | 33058 | - | GH13_44 |
| pfam | Rep_1692_c_0 | Rep_1692_c_0_36 | 33131 | 33643 | - | CotE |
| NULL(UNKNOWN) | Rep_1692_c_0 | Rep_1692_c_0_37 | 33687 | 33899 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1692_c_0 | Rep_1692_c_0_38 | 33983 | 35137 | + | 3.A.11.1.1 |
Gene ID: Rep_1692_c_0_35
Type: CAZyme
Location: 31547 - 33058 (-)
Type: CAZyme
Location: 31547 - 33058 (-)
Gene ID: Rep_1692_c_0_36
Type: pfam
Location: 33131 - 33643 (-)
Type: pfam
Location: 33131 - 33643 (-)
Gene ID: Rep_1692_c_0_37
Type:
Location: 33687 - 33899 (-)
Type:
Location: 33687 - 33899 (-)
Gene ID: Rep_1692_c_0_38
Type: TC
Location: 33983 - 35137 (+)
Type: TC
Location: 33983 - 35137 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-288
Species
CAG-288 sp000437395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.