Cluster: Rep_168_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_168
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_168_c_184 | Rep_168_c_184_34 | 34372 | 34947 | - | 2.A.51.1.6 |
| TC | Rep_168_c_184 | Rep_168_c_184_35 | 35015 | 35551 | - | 2.A.51.1.6 |
| peptidase | Rep_168_c_184 | Rep_168_c_184_36 | 35573 | 39286 | - | C56.972 |
| NULL(UNKNOWN) | Rep_168_c_184 | Rep_168_c_184_37 | 39502 | 39780 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_168_c_184 | Rep_168_c_184_38 | 39813 | 41087 | + | GT4 |
| CAZyme | Rep_168_c_184 | Rep_168_c_184_39 | 41084 | 41920 | + | GT2 |
Gene ID: Rep_168_c_184_34
Type: TC
Location: 34372 - 34947 (-)
Type: TC
Location: 34372 - 34947 (-)
Gene ID: Rep_168_c_184_35
Type: TC
Location: 35015 - 35551 (-)
Type: TC
Location: 35015 - 35551 (-)
Gene ID: Rep_168_c_184_36
Type: peptidase
Location: 35573 - 39286 (-)
Type: peptidase
Location: 35573 - 39286 (-)
Gene ID: Rep_168_c_184_37
Type:
Location: 39502 - 39780 (+)
Type:
Location: 39502 - 39780 (+)
Gene ID: Rep_168_c_184_38
Type: CAZyme
Location: 39813 - 41087 (+)
Type: CAZyme
Location: 39813 - 41087 (+)
Gene ID: Rep_168_c_184_39
Type: CAZyme
Location: 41084 - 41920 (+)
Type: CAZyme
Location: 41084 - 41920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.