Cluster: Rep_168_CGC32
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_168
- CGC Family ID: CGCFAM_00034
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_168_c_165 | Rep_168_c_165_42 | 53071 | 54867 | + | GH43_4 |
| pfam | Rep_168_c_165 | Rep_168_c_165_43 | 55279 | 56214 | - | EamA | EamA |
| TC | Rep_168_c_165 | Rep_168_c_165_44 | 56228 | 57571 | - | 2.A.62.1.3 |
| CAZyme | Rep_168_c_165 | Rep_168_c_165_45 | 57592 | 59487 | - | GH13_46 |
| CAZyme | Rep_168_c_165 | Rep_168_c_165_46 | 59498 | 61417 | - | GH13_14 |
| CAZyme | Rep_168_c_165 | Rep_168_c_165_47 | 61432 | 63564 | - | GH97 |
| CAZyme | Rep_168_c_165 | Rep_168_c_165_48 | 63606 | 66311 | - | GH77 |
| TC | Rep_168_c_165 | Rep_168_c_165_49 | 66430 | 67788 | - | 2.A.2.6.2 |
| TF | Rep_168_c_165 | Rep_168_c_165_50 | 67803 | 68831 | - | LacI |
| NULL(UNKNOWN) | Rep_168_c_165 | Rep_168_c_165_51 | 68914 | 69036 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_168_c_165 | Rep_168_c_165_52 | 69074 | 72157 | + | 1.B.14.6.1 |
Gene ID: Rep_168_c_165_42
Type: CAZyme
Location: 53071 - 54867 (+)
Type: CAZyme
Location: 53071 - 54867 (+)
Gene ID: Rep_168_c_165_43
Type: pfam
Location: 55279 - 56214 (-)
Type: pfam
Location: 55279 - 56214 (-)
Gene ID: Rep_168_c_165_44
Type: TC
Location: 56228 - 57571 (-)
Type: TC
Location: 56228 - 57571 (-)
Gene ID: Rep_168_c_165_45
Type: CAZyme
Location: 57592 - 59487 (-)
Type: CAZyme
Location: 57592 - 59487 (-)
Gene ID: Rep_168_c_165_46
Type: CAZyme
Location: 59498 - 61417 (-)
Type: CAZyme
Location: 59498 - 61417 (-)
Gene ID: Rep_168_c_165_47
Type: CAZyme
Location: 61432 - 63564 (-)
Type: CAZyme
Location: 61432 - 63564 (-)
Gene ID: Rep_168_c_165_48
Type: CAZyme
Location: 63606 - 66311 (-)
Type: CAZyme
Location: 63606 - 66311 (-)
Gene ID: Rep_168_c_165_49
Type: TC
Location: 66430 - 67788 (-)
Type: TC
Location: 66430 - 67788 (-)
Gene ID: Rep_168_c_165_50
Type: TF
Location: 67803 - 68831 (-)
Type: TF
Location: 67803 - 68831 (-)
Gene ID: Rep_168_c_165_51
Type:
Location: 68914 - 69036 (+)
Type:
Location: 68914 - 69036 (+)
Gene ID: Rep_168_c_165_52
Type: TC
Location: 69074 - 72157 (+)
Type: TC
Location: 69074 - 72157 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.