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Cluster: Rep_168_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_168_c_146 Rep_168_c_146_26 22961 24310 - 2.A.66.1.23
CAZyme Rep_168_c_146 Rep_168_c_146_27 24891 27446 - GH2
pfam Rep_168_c_146 Rep_168_c_146_28 27858 28622 - Lactamase_B | Lactamase_B_2
pfam Rep_168_c_146 Rep_168_c_146_29 28622 29647 - FAD_binding_4 | MurB_C
TC Rep_168_c_146 Rep_168_c_146_30 29644 32124 - 9.A.8.1.6
TC Rep_168_c_146 Rep_168_c_146_31 32121 34685 - 3.A.9.1.2
pfam Rep_168_c_146 Rep_168_c_146_32 34710 35798 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8
pfam Rep_168_c_146 Rep_168_c_146_33 35901 36896 - SdiA-regulated | Phytase-like
CAZyme Rep_168_c_146 Rep_168_c_146_34 36906 40028 - GH2
Gene ID: Rep_168_c_146_26
Type: TC
Location: 22961 - 24310 (-)
Gene ID: Rep_168_c_146_27
Type: CAZyme
Location: 24891 - 27446 (-)
Gene ID: Rep_168_c_146_28
Type: pfam
Location: 27858 - 28622 (-)
Gene ID: Rep_168_c_146_29
Type: pfam
Location: 28622 - 29647 (-)
Gene ID: Rep_168_c_146_30
Type: TC
Location: 29644 - 32124 (-)
Gene ID: Rep_168_c_146_31
Type: TC
Location: 32121 - 34685 (-)
Gene ID: Rep_168_c_146_32
Type: pfam
Location: 34710 - 35798 (-)
Gene ID: Rep_168_c_146_33
Type: pfam
Location: 35901 - 36896 (-)
Gene ID: Rep_168_c_146_34
Type: CAZyme
Location: 36906 - 40028 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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