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Cluster: Rep_168_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_168_c_107 Rep_168_c_107_2 1075 2457 - GH16_3
NULL(UNKNOWN) Rep_168_c_107 Rep_168_c_107_3 2529 3935 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_168_c_107 Rep_168_c_107_4 4007 5527 - SusD_RagB | SusD-like_3
TC Rep_168_c_107 Rep_168_c_107_5 5554 8478 - 1.B.14.6.1
NULL(UNKNOWN) Rep_168_c_107 Rep_168_c_107_6 8576 8740 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_168_c_107 Rep_168_c_107_7 8778 8879 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_168_c_107 Rep_168_c_107_8 9206 11176 + GH97
TF Rep_168_c_107 Rep_168_c_107_9 11173 15045 + HTH_AraC
CAZyme Rep_168_c_107 Rep_168_c_107_10 15157 16326 + GH5_4
TC Rep_168_c_107 Rep_168_c_107_11 16336 18432 + 1.B.14.6.2
Gene ID: Rep_168_c_107_2
Type: CAZyme
Location: 1075 - 2457 (-)
Gene ID: Rep_168_c_107_3
Type:
Location: 2529 - 3935 (-)
Gene ID: Rep_168_c_107_4
Type: pfam
Location: 4007 - 5527 (-)
Gene ID: Rep_168_c_107_5
Type: TC
Location: 5554 - 8478 (-)
Gene ID: Rep_168_c_107_6
Type:
Location: 8576 - 8740 (-)
Gene ID: Rep_168_c_107_7
Type:
Location: 8778 - 8879 (+)
Gene ID: Rep_168_c_107_8
Type: CAZyme
Location: 9206 - 11176 (+)
Gene ID: Rep_168_c_107_9
Type: TF
Location: 11173 - 15045 (+)
Gene ID: Rep_168_c_107_10
Type: CAZyme
Location: 15157 - 16326 (+)
Gene ID: Rep_168_c_107_11
Type: TC
Location: 16336 - 18432 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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