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Cluster: Rep_1689_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1689_c_0 Rep_1689_c_0_579 707848 708963 + 3.A.1.1.26
NULL(UNKNOWN) Rep_1689_c_0 Rep_1689_c_0_580 708944 709429 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1689_c_0 Rep_1689_c_0_581 709451 709978 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1689_c_0 Rep_1689_c_0_582 709975 712026 + PL34
CAZyme Rep_1689_c_0 Rep_1689_c_0_583 712007 713911 + PL17
pfam Rep_1689_c_0 Rep_1689_c_0_584 713904 714254 + Cupin_2
pfam Rep_1689_c_0 Rep_1689_c_0_585 714256 715005 + adh_short | 3Beta_HSD | Epimerase | KR | adh_short_C2 | SDR
CAZyme Rep_1689_c_0 Rep_1689_c_0_586 715005 716192 + PL38
Gene ID: Rep_1689_c_0_579
Type: TC
Location: 707848 - 708963 (+)
Gene ID: Rep_1689_c_0_580
Type:
Location: 708944 - 709429 (+)
Gene ID: Rep_1689_c_0_581
Type:
Location: 709451 - 709978 (+)
Gene ID: Rep_1689_c_0_582
Type: CAZyme
Location: 709975 - 712026 (+)
Gene ID: Rep_1689_c_0_583
Type: CAZyme
Location: 712007 - 713911 (+)
Gene ID: Rep_1689_c_0_584
Type: pfam
Location: 713904 - 714254 (+)
Gene ID: Rep_1689_c_0_585
Type: pfam
Location: 714256 - 715005 (+)
Gene ID: Rep_1689_c_0_586
Type: CAZyme
Location: 715005 - 716192 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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