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Cluster: Rep_1689_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1689_c_0 Rep_1689_c_0_420 527587 529068 - 2.A.66.2.16
CAZyme Rep_1689_c_0 Rep_1689_c_0_421 529084 530034 - GT2
NULL(UNKNOWN) Rep_1689_c_0 Rep_1689_c_0_422 530027 531238 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1689_c_0 Rep_1689_c_0_423 531242 532153 - GT32
CAZyme Rep_1689_c_0 Rep_1689_c_0_424 532181 533221 - GT4
pfam Rep_1689_c_0 Rep_1689_c_0_425 533235 533714 - Glyco_tran_28_C
pfam Rep_1689_c_0 Rep_1689_c_0_426 533711 534184 - Alg14
TC Rep_1689_c_0 Rep_1689_c_0_427 534186 534905 - 9.B.18.1.2
pfam Rep_1689_c_0 Rep_1689_c_0_428 535045 535728 - CpsB_CapC
TC Rep_1689_c_0 Rep_1689_c_0_429 535715 537094 - 8.A.3.1.2
Gene ID: Rep_1689_c_0_420
Type: TC
Location: 527587 - 529068 (-)
Gene ID: Rep_1689_c_0_421
Type: CAZyme
Location: 529084 - 530034 (-)
Gene ID: Rep_1689_c_0_422
Type:
Location: 530027 - 531238 (-)
Gene ID: Rep_1689_c_0_423
Type: CAZyme
Location: 531242 - 532153 (-)
Gene ID: Rep_1689_c_0_424
Type: CAZyme
Location: 532181 - 533221 (-)
Gene ID: Rep_1689_c_0_425
Type: pfam
Location: 533235 - 533714 (-)
Gene ID: Rep_1689_c_0_426
Type: pfam
Location: 533711 - 534184 (-)
Gene ID: Rep_1689_c_0_427
Type: TC
Location: 534186 - 534905 (-)
Gene ID: Rep_1689_c_0_428
Type: pfam
Location: 535045 - 535728 (-)
Gene ID: Rep_1689_c_0_429
Type: TC
Location: 535715 - 537094 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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