Cluster: Rep_1689_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1689
- CGC Family ID: CGCFAM_11018
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1689_c_0 | Rep_1689_c_0_1571 | 1748812 | 1749528 | - | CE12 |
| NULL(UNKNOWN) | Rep_1689_c_0 | Rep_1689_c_0_1572 | 1749559 | 1749873 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1573 | 1749868 | 1750677 | - | 3.A.1.132.3 |
| pfam | Rep_1689_c_0 | Rep_1689_c_0_1574 | 1750774 | 1751805 | - | DUF1540 | DUF1540 | VTT_dom |
| pfam | Rep_1689_c_0 | Rep_1689_c_0_1575 | 1751802 | 1752629 | - | PseudoU_synth_2 |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1576 | 1752697 | 1753581 | - | 3.A.1.3.25 |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1577 | 1753581 | 1755038 | - | 3.A.1.3.20 |
Gene ID: Rep_1689_c_0_1571
Type: CAZyme
Location: 1748812 - 1749528 (-)
Type: CAZyme
Location: 1748812 - 1749528 (-)
Gene ID: Rep_1689_c_0_1572
Type:
Location: 1749559 - 1749873 (+)
Type:
Location: 1749559 - 1749873 (+)
Gene ID: Rep_1689_c_0_1573
Type: TC
Location: 1749868 - 1750677 (-)
Type: TC
Location: 1749868 - 1750677 (-)
Gene ID: Rep_1689_c_0_1574
Type: pfam
Location: 1750774 - 1751805 (-)
Type: pfam
Location: 1750774 - 1751805 (-)
Gene ID: Rep_1689_c_0_1575
Type: pfam
Location: 1751802 - 1752629 (-)
Type: pfam
Location: 1751802 - 1752629 (-)
Gene ID: Rep_1689_c_0_1576
Type: TC
Location: 1752697 - 1753581 (-)
Type: TC
Location: 1752697 - 1753581 (-)
Gene ID: Rep_1689_c_0_1577
Type: TC
Location: 1753581 - 1755038 (-)
Type: TC
Location: 1753581 - 1755038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Acholeplasmatales
Family
Anaeroplasmataceae
Genus
CAG-307
Species
CAG-307 sp001916215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.