Cluster: Rep_1689_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1689
- CGC Family ID: CGCFAM_11015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1689_c_0 | Rep_1689_c_0_1384 | 1547115 | 1548908 | + | 3.A.1.106.8 |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1385 | 1548908 | 1550671 | + | 3.A.1.135.5 |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1386 | 1550740 | 1551567 | + | 1.C.113.1.10 |
| pfam | Rep_1689_c_0 | Rep_1689_c_0_1387 | 1551530 | 1552150 | - | DUF998 |
| CAZyme | Rep_1689_c_0 | Rep_1689_c_0_1388 | 1552227 | 1553510 | + | GH28 |
Gene ID: Rep_1689_c_0_1384
Type: TC
Location: 1547115 - 1548908 (+)
Type: TC
Location: 1547115 - 1548908 (+)
Gene ID: Rep_1689_c_0_1385
Type: TC
Location: 1548908 - 1550671 (+)
Type: TC
Location: 1548908 - 1550671 (+)
Gene ID: Rep_1689_c_0_1386
Type: TC
Location: 1550740 - 1551567 (+)
Type: TC
Location: 1550740 - 1551567 (+)
Gene ID: Rep_1689_c_0_1387
Type: pfam
Location: 1551530 - 1552150 (-)
Type: pfam
Location: 1551530 - 1552150 (-)
Gene ID: Rep_1689_c_0_1388
Type: CAZyme
Location: 1552227 - 1553510 (+)
Type: CAZyme
Location: 1552227 - 1553510 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Acholeplasmatales
Family
Anaeroplasmataceae
Genus
CAG-307
Species
CAG-307 sp001916215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.