Cluster: Rep_1689_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1689
- CGC Family ID: CGCFAM_00060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1689_c_0 | Rep_1689_c_0_1315 | 1470673 | 1471593 | + | GT2 |
| STP | Rep_1689_c_0 | Rep_1689_c_0_1316 | 1471609 | 1472754 | - | Aminotran_1_2 |
| pfam | Rep_1689_c_0 | Rep_1689_c_0_1317 | 1472870 | 1473886 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| TC | Rep_1689_c_0 | Rep_1689_c_0_1318 | 1473934 | 1474635 | + | 3.A.1.122.14 |
Gene ID: Rep_1689_c_0_1315
Type: CAZyme
Location: 1470673 - 1471593 (+)
Type: CAZyme
Location: 1470673 - 1471593 (+)
Gene ID: Rep_1689_c_0_1316
Type: STP
Location: 1471609 - 1472754 (-)
Type: STP
Location: 1471609 - 1472754 (-)
Gene ID: Rep_1689_c_0_1317
Type: pfam
Location: 1472870 - 1473886 (+)
Type: pfam
Location: 1472870 - 1473886 (+)
Gene ID: Rep_1689_c_0_1318
Type: TC
Location: 1473934 - 1474635 (+)
Type: TC
Location: 1473934 - 1474635 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Acholeplasmatales
Family
Anaeroplasmataceae
Genus
CAG-307
Species
CAG-307 sp001916215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.