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Cluster: Rep_1689_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1689_c_0 Rep_1689_c_0_986 1135093 1136907 + 3.A.1.135.5
TC Rep_1689_c_0 Rep_1689_c_0_987 1136897 1138783 + 3.A.1.135.5
CAZyme Rep_1689_c_0 Rep_1689_c_0_988 1138898 1140508 + CE8
pfam Rep_1689_c_0 Rep_1689_c_0_989 1140492 1141412 + YitT_membrane | DUF2179
TC Rep_1689_c_0 Rep_1689_c_0_990 1141466 1142059 + 1.A.22.1.8
NULL(UNKNOWN) Rep_1689_c_0 Rep_1689_c_0_991 1142110 1143222 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1689_c_0 Rep_1689_c_0_992 1143380 1143799 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1689_c_0 Rep_1689_c_0_993 1143814 1146024 + 3.A.1.132.6
Gene ID: Rep_1689_c_0_986
Type: TC
Location: 1135093 - 1136907 (+)
Gene ID: Rep_1689_c_0_987
Type: TC
Location: 1136897 - 1138783 (+)
Gene ID: Rep_1689_c_0_988
Type: CAZyme
Location: 1138898 - 1140508 (+)
Gene ID: Rep_1689_c_0_989
Type: pfam
Location: 1140492 - 1141412 (+)
Gene ID: Rep_1689_c_0_990
Type: TC
Location: 1141466 - 1142059 (+)
Gene ID: Rep_1689_c_0_991
Type:
Location: 1142110 - 1143222 (+)
Gene ID: Rep_1689_c_0_992
Type:
Location: 1143380 - 1143799 (+)
Gene ID: Rep_1689_c_0_993
Type: TC
Location: 1143814 - 1146024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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