Cluster: Rep_1686_CGC6
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_1686
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1686_c_30 | Rep_1686_c_30_4 | 1416 | 4136 | - | 3.A.3.23.2 |
| pfam | Rep_1686_c_30 | Rep_1686_c_30_5 | 4230 | 5036 | - | Patatin |
| peptidase | Rep_1686_c_30 | Rep_1686_c_30_6 | 5168 | 5728 | - | C56.UNW |
| CAZyme | Rep_1686_c_30 | Rep_1686_c_30_7 | 5842 | 7323 | - | GH77 |
| CAZyme | Rep_1686_c_30 | Rep_1686_c_30_8 | 7320 | 9053 | - | GH13_31 |
| TC | Rep_1686_c_30 | Rep_1686_c_30_9 | 9057 | 10118 | - | 3.A.1.1.6 |
| TC | Rep_1686_c_30 | Rep_1686_c_30_10 | 10121 | 12481 | - | 3.A.1.1.6 |
| TC | Rep_1686_c_30 | Rep_1686_c_30_11 | 12549 | 13856 | - | 3.A.1.1.26 |
| pfam | Rep_1686_c_30 | Rep_1686_c_30_12 | 13874 | 16324 | - | PUD | PUD | Bact_surface_Ig-like |
| CAZyme | Rep_1686_c_30 | Rep_1686_c_30_13 | 16507 | 19308 | + | CBM41 | GH13_14 |
| NULL(UNKNOWN) | Rep_1686_c_30 | Rep_1686_c_30_14 | 19371 | 20384 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1686_c_30 | Rep_1686_c_30_15 | 20669 | 21589 | - | DUF1189 |
| CAZyme | Rep_1686_c_30 | Rep_1686_c_30_16 | 21591 | 23210 | - | GH13_36 |
| pfam | Rep_1686_c_30 | Rep_1686_c_30_17 | 23197 | 23694 | - | RDD |
| CAZyme | Rep_1686_c_30 | Rep_1686_c_30_18 | 23839 | 25671 | + | CBM34 | GH13_20 |
Gene ID: Rep_1686_c_30_4
Type: TC
Location: 1416 - 4136 (-)
Type: TC
Location: 1416 - 4136 (-)
Gene ID: Rep_1686_c_30_5
Type: pfam
Location: 4230 - 5036 (-)
Type: pfam
Location: 4230 - 5036 (-)
Gene ID: Rep_1686_c_30_6
Type: peptidase
Location: 5168 - 5728 (-)
Type: peptidase
Location: 5168 - 5728 (-)
Gene ID: Rep_1686_c_30_7
Type: CAZyme
Location: 5842 - 7323 (-)
Type: CAZyme
Location: 5842 - 7323 (-)
Gene ID: Rep_1686_c_30_8
Type: CAZyme
Location: 7320 - 9053 (-)
Type: CAZyme
Location: 7320 - 9053 (-)
Gene ID: Rep_1686_c_30_9
Type: TC
Location: 9057 - 10118 (-)
Type: TC
Location: 9057 - 10118 (-)
Gene ID: Rep_1686_c_30_10
Type: TC
Location: 10121 - 12481 (-)
Type: TC
Location: 10121 - 12481 (-)
Gene ID: Rep_1686_c_30_11
Type: TC
Location: 12549 - 13856 (-)
Type: TC
Location: 12549 - 13856 (-)
Gene ID: Rep_1686_c_30_12
Type: pfam
Location: 13874 - 16324 (-)
Type: pfam
Location: 13874 - 16324 (-)
Gene ID: Rep_1686_c_30_13
Type: CAZyme
Location: 16507 - 19308 (+)
Type: CAZyme
Location: 16507 - 19308 (+)
Gene ID: Rep_1686_c_30_14
Type:
Location: 19371 - 20384 (-)
Type:
Location: 19371 - 20384 (-)
Gene ID: Rep_1686_c_30_15
Type: pfam
Location: 20669 - 21589 (-)
Type: pfam
Location: 20669 - 21589 (-)
Gene ID: Rep_1686_c_30_16
Type: CAZyme
Location: 21591 - 23210 (-)
Type: CAZyme
Location: 21591 - 23210 (-)
Gene ID: Rep_1686_c_30_17
Type: pfam
Location: 23197 - 23694 (-)
Type: pfam
Location: 23197 - 23694 (-)
Gene ID: Rep_1686_c_30_18
Type: CAZyme
Location: 23839 - 25671 (+)
Type: CAZyme
Location: 23839 - 25671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
ML615J-28
Family
CAG-698
Genus
Tener-01
Species
Tener-01 sp001940985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.