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Cluster: Rep_1686_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1686_c_29 Rep_1686_c_29_23 29656 32253 - 3.A.3.2.21
pfam Rep_1686_c_29 Rep_1686_c_29_24 32456 33148 - ABC_trans_CmpB
pfam Rep_1686_c_29 Rep_1686_c_29_25 33157 35484 - FtsX | FtsX
TC Rep_1686_c_29 Rep_1686_c_29_26 35478 36179 - 3.A.1.122.14
peptidase Rep_1686_c_29 Rep_1686_c_29_27 36289 36870 - C15.001
pfam Rep_1686_c_29 Rep_1686_c_29_28 36883 37983 - Amidohydro_2
CAZyme Rep_1686_c_29 Rep_1686_c_29_29 37996 39558 - GH3
Gene ID: Rep_1686_c_29_23
Type: TC
Location: 29656 - 32253 (-)
Gene ID: Rep_1686_c_29_24
Type: pfam
Location: 32456 - 33148 (-)
Gene ID: Rep_1686_c_29_25
Type: pfam
Location: 33157 - 35484 (-)
Gene ID: Rep_1686_c_29_26
Type: TC
Location: 35478 - 36179 (-)
Gene ID: Rep_1686_c_29_27
Type: peptidase
Location: 36289 - 36870 (-)
Gene ID: Rep_1686_c_29_28
Type: pfam
Location: 36883 - 37983 (-)
Gene ID: Rep_1686_c_29_29
Type: CAZyme
Location: 37996 - 39558 (-)

Taxonomic Lineage

Domain
Bacteria
Family
CAG-698

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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