dbCAN Logo

Cluster: Rep_1686_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1686_c_13 Rep_1686_c_13_18 14910 16793 + GH20
STP Rep_1686_c_13 Rep_1686_c_13_19 16783 19956 + SBP_bac_1
TC Rep_1686_c_13 Rep_1686_c_13_20 19970 20965 + 3.A.1.1.20
TC Rep_1686_c_13 Rep_1686_c_13_21 20965 21963 + 3.A.1.1.39
Gene ID: Rep_1686_c_13_18
Type: CAZyme
Location: 14910 - 16793 (+)
Gene ID: Rep_1686_c_13_19
Type: STP
Location: 16783 - 19956 (+)
Gene ID: Rep_1686_c_13_20
Type: TC
Location: 19970 - 20965 (+)
Gene ID: Rep_1686_c_13_21
Type: TC
Location: 20965 - 21963 (+)

Taxonomic Lineage

Domain
Bacteria
Family
CAG-698

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List