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Cluster: Rep_167_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_167_c_34 Rep_167_c_34_2 369 2426 + GH5_21
NULL(UNKNOWN) Rep_167_c_34 Rep_167_c_34_3 2668 2769 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_167_c_34 Rep_167_c_34_4 2845 5946 + 1.B.14.6.1
pfam Rep_167_c_34 Rep_167_c_34_5 5968 7761 + SusD_RagB | SusD-like_3
CAZyme Rep_167_c_34 Rep_167_c_34_6 7888 10401 + GH43_2 | GH8
CAZyme Rep_167_c_34 Rep_167_c_34_7 10423 12348 + GH97
CAZyme Rep_167_c_34 Rep_167_c_34_8 12372 13760 + CBM6 | GH43_29
CAZyme Rep_167_c_34 Rep_167_c_34_9 13900 15360 - GH43_7 | GH43_7
NULL(UNKNOWN) Rep_167_c_34 Rep_167_c_34_10 15357 16049 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_167_c_34 Rep_167_c_34_11 16075 18636 - GH3
CAZyme Rep_167_c_34 Rep_167_c_34_12 18639 21629 - GH2
CAZyme Rep_167_c_34 Rep_167_c_34_13 21641 23980 - GH31_4
CAZyme Rep_167_c_34 Rep_167_c_34_14 24007 26490 - GH115
CAZyme Rep_167_c_34 Rep_167_c_34_15 26508 29081 - GH115
CAZyme Rep_167_c_34 Rep_167_c_34_16 29113 30474 - CBM6 | GH43_29
CAZyme Rep_167_c_34 Rep_167_c_34_17 30500 32368 - GH97
CAZyme Rep_167_c_34 Rep_167_c_34_18 32401 34344 - CE1
CAZyme Rep_167_c_34 Rep_167_c_34_19 34358 36547 - CE1 | GH10
CAZyme Rep_167_c_34 Rep_167_c_34_20 36571 37602 - CE6
pfam Rep_167_c_34 Rep_167_c_34_21 37933 38856 - adh_short | adh_short_C2
pfam Rep_167_c_34 Rep_167_c_34_22 38925 39629 - DUF4840
TC Rep_167_c_34 Rep_167_c_34_23 40157 41815 + 9.B.174.1.2
Gene ID: Rep_167_c_34_2
Type: CAZyme
Location: 369 - 2426 (+)
Gene ID: Rep_167_c_34_3
Type:
Location: 2668 - 2769 (+)
Gene ID: Rep_167_c_34_4
Type: TC
Location: 2845 - 5946 (+)
Gene ID: Rep_167_c_34_5
Type: pfam
Location: 5968 - 7761 (+)
Gene ID: Rep_167_c_34_6
Type: CAZyme
Location: 7888 - 10401 (+)
Gene ID: Rep_167_c_34_7
Type: CAZyme
Location: 10423 - 12348 (+)
Gene ID: Rep_167_c_34_8
Type: CAZyme
Location: 12372 - 13760 (+)
Gene ID: Rep_167_c_34_9
Type: CAZyme
Location: 13900 - 15360 (-)
Gene ID: Rep_167_c_34_10
Type:
Location: 15357 - 16049 (-)
Gene ID: Rep_167_c_34_11
Type: CAZyme
Location: 16075 - 18636 (-)
Gene ID: Rep_167_c_34_12
Type: CAZyme
Location: 18639 - 21629 (-)
Gene ID: Rep_167_c_34_13
Type: CAZyme
Location: 21641 - 23980 (-)
Gene ID: Rep_167_c_34_14
Type: CAZyme
Location: 24007 - 26490 (-)
Gene ID: Rep_167_c_34_15
Type: CAZyme
Location: 26508 - 29081 (-)
Gene ID: Rep_167_c_34_16
Type: CAZyme
Location: 29113 - 30474 (-)
Gene ID: Rep_167_c_34_17
Type: CAZyme
Location: 30500 - 32368 (-)
Gene ID: Rep_167_c_34_18
Type: CAZyme
Location: 32401 - 34344 (-)
Gene ID: Rep_167_c_34_19
Type: CAZyme
Location: 34358 - 36547 (-)
Gene ID: Rep_167_c_34_20
Type: CAZyme
Location: 36571 - 37602 (-)
Gene ID: Rep_167_c_34_21
Type: pfam
Location: 37933 - 38856 (-)
Gene ID: Rep_167_c_34_22
Type: pfam
Location: 38925 - 39629 (-)
Gene ID: Rep_167_c_34_23
Type: TC
Location: 40157 - 41815 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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