dbCAN Logo

Cluster: Rep_167_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_167_c_26 Rep_167_c_26_2 1186 2283 + 3.A.1.132.3
pfam Rep_167_c_26 Rep_167_c_26_3 2348 3253 - LYTB
pfam Rep_167_c_26 Rep_167_c_26_4 3250 4350 - DegT_DnrJ_EryC1
TC Rep_167_c_26 Rep_167_c_26_5 4472 5056 - 9.B.18.1.3
CAZyme Rep_167_c_26 Rep_167_c_26_6 5159 5926 - GT2
CAZyme Rep_167_c_26 Rep_167_c_26_7 6058 6867 + GH16_3
CAZyme Rep_167_c_26 Rep_167_c_26_8 6869 7681 + GT2
pfam Rep_167_c_26 Rep_167_c_26_9 7670 8827 - Glyco_tran_WbsX
CAZyme Rep_167_c_26 Rep_167_c_26_10 8838 9662 - GT23
TC Rep_167_c_26 Rep_167_c_26_11 9679 10740 - 9.B.183.1.5
Gene ID: Rep_167_c_26_2
Type: TC
Location: 1186 - 2283 (+)
Gene ID: Rep_167_c_26_3
Type: pfam
Location: 2348 - 3253 (-)
Gene ID: Rep_167_c_26_4
Type: pfam
Location: 3250 - 4350 (-)
Gene ID: Rep_167_c_26_5
Type: TC
Location: 4472 - 5056 (-)
Gene ID: Rep_167_c_26_6
Type: CAZyme
Location: 5159 - 5926 (-)
Gene ID: Rep_167_c_26_7
Type: CAZyme
Location: 6058 - 6867 (+)
Gene ID: Rep_167_c_26_8
Type: CAZyme
Location: 6869 - 7681 (+)
Gene ID: Rep_167_c_26_9
Type: pfam
Location: 7670 - 8827 (-)
Gene ID: Rep_167_c_26_10
Type: CAZyme
Location: 8838 - 9662 (-)
Gene ID: Rep_167_c_26_11
Type: TC
Location: 9679 - 10740 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List