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Cluster: Rep_167_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_167_c_105 Rep_167_c_105_2 1303 3507 + 3.A.10.1.11
CAZyme Rep_167_c_105 Rep_167_c_105_3 3699 6014 + GH31_3
pfam Rep_167_c_105 Rep_167_c_105_4 6133 6705 + ABC_tran
pfam Rep_167_c_105 Rep_167_c_105_5 6713 8245 + Endonuclease_NS | UPF0014
TC Rep_167_c_105 Rep_167_c_105_6 8288 9604 + 2.A.66.1.3
pfam Rep_167_c_105 Rep_167_c_105_7 9827 10117 + DUF4491
TC Rep_167_c_105 Rep_167_c_105_8 10218 11579 + 2.A.25.1.3
Gene ID: Rep_167_c_105_2
Type: TC
Location: 1303 - 3507 (+)
Gene ID: Rep_167_c_105_3
Type: CAZyme
Location: 3699 - 6014 (+)
Gene ID: Rep_167_c_105_4
Type: pfam
Location: 6133 - 6705 (+)
Gene ID: Rep_167_c_105_5
Type: pfam
Location: 6713 - 8245 (+)
Gene ID: Rep_167_c_105_6
Type: TC
Location: 8288 - 9604 (+)
Gene ID: Rep_167_c_105_7
Type: pfam
Location: 9827 - 10117 (+)
Gene ID: Rep_167_c_105_8
Type: TC
Location: 10218 - 11579 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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