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Cluster: Rep_167_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_167_c_83 Rep_167_c_83_2 687 2804 + 3.A.16.1.1
pfam Rep_167_c_83 Rep_167_c_83_3 2794 3657 + CTP_transf_1
CAZyme Rep_167_c_83 Rep_167_c_83_4 3658 4842 - GT19
pfam Rep_167_c_83 Rep_167_c_83_5 4883 5653 - SurE
TC Rep_167_c_83 Rep_167_c_83_6 5774 6538 + 8.A.3.2.3
pfam Rep_167_c_83 Rep_167_c_83_7 6548 7471 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_167_c_83 Rep_167_c_83_8 7455 8162 + DUF5683
CAZyme Rep_167_c_83 Rep_167_c_83_9 8198 9568 + GH23
STP Rep_167_c_83 Rep_167_c_83_10 9591 11870 + HD
CAZyme Rep_167_c_83 Rep_167_c_83_11 11955 12932 + CE8
Gene ID: Rep_167_c_83_2
Type: TC
Location: 687 - 2804 (+)
Gene ID: Rep_167_c_83_3
Type: pfam
Location: 2794 - 3657 (+)
Gene ID: Rep_167_c_83_4
Type: CAZyme
Location: 3658 - 4842 (-)
Gene ID: Rep_167_c_83_5
Type: pfam
Location: 4883 - 5653 (-)
Gene ID: Rep_167_c_83_6
Type: TC
Location: 5774 - 6538 (+)
Gene ID: Rep_167_c_83_7
Type: pfam
Location: 6548 - 7471 (+)
Gene ID: Rep_167_c_83_8
Type: pfam
Location: 7455 - 8162 (+)
Gene ID: Rep_167_c_83_9
Type: CAZyme
Location: 8198 - 9568 (+)
Gene ID: Rep_167_c_83_10
Type: STP
Location: 9591 - 11870 (+)
Gene ID: Rep_167_c_83_11
Type: CAZyme
Location: 11955 - 12932 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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